aaindex
|
AAindex |
addgene
|
Addgene Plasmid Repository |
allergome
|
Allergome |
amoebadb
|
AmoebaDB |
arachnoserver
|
ArachnoServer |
araport
|
Arabidopsis Information Portal |
archdb
|
ArchDB |
bdgp.insertion
|
BDGP insertion DB |
beetlebase
|
Tribolium Genome Database -- Insertion |
biocyc
|
BioCyc collection of metabolic pathway databases |
bykdb
|
Bacterial Tyrosine Kinase Database |
cath
|
CATH Protein Structural Domain Superfamily |
ccds
|
Consensus CDS |
cdd
|
Conserved Domain Database at NCBI |
cgd
|
Candida Genome Database |
crisprdb
|
CRISPRdb |
cryptodb
|
CryptoDB |
cubedb
|
Cube db |
dbamp
|
Database of Anti-Microbial Peptides |
dbest
|
EST database maintained at the NCBI. |
dbmhc
|
Database of human Major Histocompatibility Complex |
dbsnp
|
dbSNP Reference SNP number |
dgrc
|
Drosophila Genomics Resource Center |
dictybase
|
dictyBase |
dip
|
Database of Interacting Proteins |
disprot
|
DisProt |
drugbank
|
DrugBank |
echinobase
|
Echinobase |
ecocyc
|
EcoCyc |
ecoliwiki
|
EcoliWiki from EcoliHub |
ena.embl
|
European Nucleotide Archive |
ensembl
|
Ensembl Gene |
ensembl.bacteria
|
Ensembl Bacteria |
ensembl.fungi
|
Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi. |
ensembl.metazoa
|
Ensembl Metazoa, the Ensembl database for accessing genome-scale data from non-vertebrate metazoa. |
epd
|
Eukaryotic Promoter Database |
eropmoscow
|
Endogenous Regulatory OligoPeptide knowledgebase-Moscow |
faldo
|
Feature Annotation Location Description Ontology |
flybase
|
FlyBase Gene |
genatlas
|
Genatlas |
genbank
|
GenBank |
genedb
|
GeneDB |
genefarm
|
GeneFarm |
geo
|
NCBI Gene Expression Omnibus |
giardiadb
|
GiardiaDB |
glycomedb
|
GlycomeDB |
glytoucan
|
GlyTouCan |
gnomad
|
Genome Aggregation Database |
gpcrdb
|
G protein-coupled receptor database |
greengenes
|
16S rRNA gene database |
hgmd
|
Human Gene Mutation Database |
hmdb
|
Human Metabolome Database |
hogenom
|
Database of Complete Genome Homologous Genes Families |
homologene
|
HomoloGene |
hovergen
|
Homologous Vertebrate Genes Database |
hprd
|
Human Protein Reference Database |
hssp
|
Database of homology-derived secondary structure of proteins |
huge
|
Human Unidentified Gene-Encoded |
idog
|
Integrated Resource for Domestic Dog |
iedb.assay
|
Immune Epitope Database Assays |
imgt.hla
|
IMGT/HLA human major histocompatibility complex sequence database |
insdc
|
Nucleotide Sequence Database |
interpro
|
InterPro |
ipi
|
International Protein Index |
iresite
|
Database of experimentally verified IRES structures |
isfinder
|
Insertion sequence elements database |
lgic
|
Ligand-Gated Ion Channel database |
licebase
|
LiceBase |
ligandexpo
|
Ligand Expo |
lncbook
|
LncBook |
lrg
|
Locus Reference Genomic |
maizegdb.locus
|
MaizeGDB Locus |
mao
|
Multiple alignment |
mgi
|
Mouse Genome Informatics |
mirbase
|
miRBase pre-miRNA |
mirbase.mature
|
miRBase mature miRNA |
mirex
|
mirEX |
mirnest
|
miRNEST |
mirtarbase
|
mirTarBase |
mobidb
|
MobiDB |
myco.lepra
|
MycoBrowser leprae |
myco.marinum
|
MycoBrowser marinum |
myco.smeg
|
MycoBrowser smegmatis |
mycobank
|
Fungal Nomenclature and Species Bank |
ncbigene
|
NCBI Gene |
ncbiprotein
|
NCBI Protein |
nextprot
|
nextProt |
nucleardb
|
NucleaRDB |
nucleotide
|
Nucleotide |
pandit
|
Protein and Associated NucleotideDomains with Inferred Trees |
pass2
|
Protein Alignment organised as Structural Superfamily |
pazar
|
Pazar Transcription Factor |
peptideatlas.peptide
|
PeptideAtlas Peptide |
peroxibase
|
Peroxibase |
pfam
|
Pfam protein family |
phylomedb
|
PhylomeDB |
plasmodb
|
PlasmoDB |
polbase
|
PolBase |
pombase
|
PomBase |
ppdb
|
Pesticide Properties DataBase |
prints
|
PRINTS compendium of protein fingerprints |
prosite
|
PROSITE |
pseudogene
|
PseudoGene |
rebase
|
REBASE Enzyme Number |
refseq
|
Reference Sequence Collection |
rfam
|
Rfam database of RNA families |
rgd
|
Rat Genome Database |
rnacentral
|
RNACentral |
rouge
|
Rodent Unidentified Gene-Encoded Large Proteins |
s_mart_db
|
The S/MAR transaction DataBase |
sgd
|
Saccharomyces Genome Database |
sgd.pathways
|
Saccharomyces genome database pathways |
sgn
|
Sol Genomics Network |
sitex
|
SitEx |
snodb
|
snoDB |
snornabase
|
snoRNABase |
soybase
|
SoyBase |
spbase
|
SpBase |
string
|
Search Tool for Retrieval of Interacting Genes/Proteins |
swissregulon
|
SwissRegulon |
togovar
|
TogoVar |
treebase
|
TreeBASE |
treefam
|
TreeFam |
trichdb
|
TrichDB |
tritrypdb
|
TriTrypDB |
trnadbce
|
tRNA Gene Database |
unigene
|
UniGene |
uniprot
|
UniProt Protein |
unite
|
Molecular database for the identification of fungi |
utrdb
|
UTRdb |
vbase2
|
Integrative database of germ-line V genes from the immunoglobulin loci of human and mouse |
vectorbase
|
Bioinformatics Resource Center for Invertebrate Vectors of Human Pathogens |
viperdb
|
VIPERdb |
viralzone
|
ViralZone |
worfdb
|
C. elegans ORFeome cloning project |
wormbase
|
WormBase |
zfin
|
Zebrafish Information Network Gene |