Registry Protein and Associated NucleotideDomains with Inferred Trees Provider

PANDIT is a collection of multiple sequence alignments and phylogenetic trees covering many common protein domains.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the pfam prefix. For all use cases, you should use pfam instead of pandit.

Prefix
pandit
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
PF00004   Resolve
Pattern for CURIES
Could not construct CURIE pattern
Example CURIE
pandit:PF00004
Reviewer
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Ontology
Provides
pfam
Metaregistry Protein and Associated NucleotideDomains with Inferred Trees

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for pandit with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Prefix Commons prefixcommons pandit
Registry of Research Data Repositories re3data r3d100011232
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE pandit:PF00004 is used to demonstrate the provides available for pandit. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Protein and Associated NucleotideDomains with Inferred Trees pandit http://www.ebi.ac.uk/goldman-srv/pandit/pandit.cgi?action=browse&fam=PF00004
Bioregistry bioregistry https://bioregistry.io/pandit:PF00004