Rat Genome Database seeks to collect, consolidate, and integrate rat genomic and genetic data with curated functional and physiological data and make these data widely available to the scientific community. This collection references genes.

Alternative Prefixes
biomedical science comparative genomics dna gene genome genomics molecular medicine ontology phenomics quantitative genetics translational medicine veterinary medicine
Homepage @ratgenome
Jennifer R Smith   0000-0002-6443-9376
Pattern for Local Unique Identifiers

Local identifiers in Rat Genome Database should match this regular expression:

Example Local Unique Identifier
7499841   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Rat Genome Database should match this regular expression:

Example CURIE
Metaregistry Rat Genome Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 14 mappings to external registries for rgd with 6 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl RGD
BioContext biocontext RGD
BioPortal BioPortal Prefixes logo bioportal RGD
Cellosaurus Cellosaurus Registry logo cellosaurus RGD
EDAM EDAM Ontology logo edam 2620
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.pfg82t
GO Gene Ontology Registry logo go RGD
Identifiers.org Identifiers.org logo miriam rgd
N2T Name-to-Thing logo n2t rgd
NCBI National Center for Biotechnology Information Registry logo ncbi RGD
Prefix Commons Prefix Commons logo prefixcommons rgd
re3data Registry of Research Data Repositories logo re3data r3d100010417
UniProt UniProt Cross-ref database logo uniprot DB-0091
Wikidata Wikidata Property logo wikidata P3853

Providers are various services that resolve CURIEs to URLs. The example CURIE rgd:7499841 is used to demonstrate the provides available for rgd. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Rat Genome Database rgd http://rgd.mcw.edu/rgdweb/report/gene/main.html?id=7499841
Bioregistry bioregistry https://bioregistry.io/rgd:7499841
Identifiers.org miriam https://identifiers.org/rgd:7499841
Name-to-Thing n2t https://n2t.net/rgd:7499841
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
agr RGD through the Alliance of Genome Resources https://www.alliancegenome.org/gene/RGD:7499841
bio2rdf Bio2RDF http://bio2rdf.org/rgd:7499841