FlyBase is the database of the Drosophila Genome Projects and of associated literature.

Preferred Prefix
Alternative Prefixes
FB FlyBase
allele anatomy bioinformatics blast comparative genomics controlled term dna drosophilidae expression faseb list functional genomics gene genetics genome genomics genotype image image collection interaction life science life-cycle molecular biology molecular genetics movie mutant phenotype rna-seq sequence stock video resource
Victoria K. Jenkins   0000-0002-1567-7626
Pattern for Local Unique Identifiers

Local identifiers in FlyBase Gene should match this regular expression:

Example Local Unique Identifier
FBgn0011293   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from FlyBase Gene should match this regular expression:

Example CURIE

A summary of the relations in the Bioregistry schema can be found here.

Has Parts (bfo:0000051 )
FBcv fbrf FBSP fbtc
In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry FlyBase Gene

The metaregistry provides mappings between the Bioregistry and other registries. There are 15 mappings to external registries for this resource with 9 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext FlyBase
Cellosaurus Cellosaurus Registry logo cellosaurus FlyBase
EDAM EDAM Ontology logo edam 1089
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.wrvze3
GO Gene Ontology Registry logo go FB
Integbio Integbio logo integbio nbdc00064 logo miriam fb
N2T Name-to-Thing logo n2t fb
NCBI National Center for Biotechnology Information Registry logo ncbi FLYBASE
Pathguide Pathguide logo pathguide 460
Prefix Commons Prefix Commons logo prefixcommons flybase
re3data Registry of Research Data Repositories logo re3data r3d100010591
RRID Research Resource Identifiers logo rrid FlyBase
UniProt UniProt Cross-ref database logo uniprot DB-0026
Wikidata Wikidata Property logo wikidata P3852

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier FBgn0011293 is used to demonstrate the providers available for FlyBase Gene. A guide for curating additional providers can be found here.

Name Metaprefix URI
FlyBase Gene flybase
Bioregistry bioregistry miriam
Name-to-Thing n2t
Research Resource Identifiers rrid
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from or Prefix Commons, and need extra curation.

Code Name URL
agr FlyBase through the Alliance of Genome Resources
bio2rdf Bio2RDF