FlyBase is the database of the Drosophila Genome Projects and of associated literature.
flybase
FlyBase
Local identifiers in FlyBase Gene should match this
regular expression:
^FB\w{2}\d{7}$
Compact URIs (CURIEs) constructed from FlyBase Gene should match
this regular expression:
^flybase:FB\w{2}\d{7}$
The metaregistry provides mappings between the Bioregistry and other registries. There are
12 mappings to external registries for flybase
with
7 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
FlyBase
|
|
Cellosaurus Registry | cellosaurus |
FlyBase
|
|
EDAM Ontology | edam |
1089
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.wrvze3
|
|
Gene Ontology Registry | go |
FB
|
|
Identifiers.org
![]() |
miriam |
fb
|
|
Name-to-Thing
![]() |
n2t |
fb
|
|
National Center for Biotechnology Information Registry | ncbi |
FLYBASE
|
|
Prefix Commons | prefixcommons |
flybase
|
|
Registry of Research Data Repositories | re3data |
r3d100010591
|
|
UniProt Cross-ref database | uniprot |
DB-0026
|
|
Wikidata Property
|
wikidata |
P3852
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
flybase:FBgn0011293
is used to demonstrate the provides available for
flybase
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
FlyBase Gene | flybase |
https://flybase.org/reports/FBgn0011293 |
Bioregistry | bioregistry |
https://bioregistry.io/flybase:FBgn0011293 |
Identifiers.org | miriam |
https://identifiers.org/fb:FBgn0011293 |
Name-to-Thing | n2t |
https://n2t.net/fb:FBgn0011293 |
None | agr |
https://www.alliancegenome.org/gene/FB:FBgn0011293 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
agr |
FlyBase through the Alliance of Genome Resources | https://www.alliancegenome.org/gene/FB:FBgn0011293 |