IPI provides a top level guide to the main databases that describe the proteomes of higher eukaryotic organisms. IPI maintaisn a database of cross references between the primary data sources, it provides minimally redundant but complete sets of proteins for featured species, and it maintains stable and unique identifiers.
- Prefix
ipi- Keywords
- protein
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- IPI00000001 Resolve
- Example CURIE
- ipi:IPI00000001
- Publications
- 2004 The International Protein Index: an integrated database for proteomics experiments
Metaregistry International Protein Index
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
IPI
|
|
Integbio
|
integbio |
nbdc00911
|
|
Prefix Commons
|
prefixcommons |
ipi
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier IPI00000001 is used to demonstrate the providers
available for International Protein Index. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| International Protein Index | ipi |
http://www.ebi.ac.uk/cgi-bin/dbfetch?db=IPI&id=IPI00000001&format=default |
| Bioregistry | bioregistry |
https://bioregistry.io/ipi:IPI00000001 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/ipi:IPI00000001 |