Cube-DB is a database of pre-evaluated results for detection of functional divergence in human/vertebrate protein families. It analyzes comparable taxonomical samples for all paralogues under consideration, storing functional specialisation at the level of residues. The data are presented as a table of per-residue scores, and mapped onto related structures where available.
website down as of 2021-10-04
Local identifiers in Cube db should match this
Compact URIs (CURIEs) constructed from Cube db should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for
|Registry Name||Metaprefix||External Prefix|
Providers are various services that resolve CURIEs to URLs. The example CURIE
cubedb:AKR is used to demonstrate the provides available for
cubedb. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.