Registry NCBI Gene Expression Omnibus
The Gene Expression Omnibus (GEO) is a gene expression repository providing a curated, online resource for gene expression data browsing, query and retrieval.
- Prefix
geo- Links
- Homepage OWL
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in NCBI Gene Expression Omnibus should match this regular expression:
^G(PL|SM|SE|DS)\d+$ - Example Local Unique Identifier
- GDS1234 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from NCBI Gene Expression Omnibus should match this regular expression:
^geo:G(PL|SM|SE|DS)\d+$ - Example CURIE
- geo:GDS1234
- Publications
- 2002 Gene Expression Omnibus: NCBI gene expression and hybridization array data repository.
Metaregistry NCBI Gene Expression Omnibus
The metaregistry provides mappings between the Bioregistry and other registries. There are
9 mappings to external registries for geo with
3 unique external prefixes.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| AberOWL | aberowl |
GEO
|
| BioContext | biocontext |
GEO
|
| Cellosaurus Registry | cellosaurus |
GEO
|
| EDAM Ontology | edam |
1147
|
FAIRSharing
|
fairsharing |
FAIRsharing.27rndz
|
| Gene Ontology Registry | go |
GEO
|
Identifiers.org
|
miriam |
geo
|
Name-to-Thing
|
n2t |
geo
|
| Prefix Commons | prefixcommons |
geo
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
geo:GDS1234
is used to demonstrate the provides available for
geo. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.