The Gene Expression Omnibus (GEO) is a gene expression repository providing a curated, online resource for gene expression data browsing, query and retrieval.
geo
Local identifiers in NCBI Gene Expression Omnibus should match this
regular expression:
^G(PL|SM|SE|DS)\d+$
Compact URIs (CURIEs) constructed from NCBI Gene Expression Omnibus should match
this regular expression:
^geo:G(PL|SM|SE|DS)\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
10 mappings to external registries for geo
with
4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL
![]() |
aberowl |
GEO
|
|
BioContext | biocontext |
GEO
|
|
Cellosaurus
![]() |
cellosaurus |
GEO
|
|
EDAM
|
edam |
1147
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.5hc8vt
|
|
GO
![]() |
go |
GEO
|
|
Identifiers.org
![]() |
miriam |
geo
|
|
N2T
![]() |
n2t |
geo
|
|
Prefix Commons
|
prefixcommons |
geo
|
|
re3data
![]() |
re3data |
r3d100010283
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
geo:GDS1234
is used to demonstrate the provides available for
geo
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/geo:GDS1234 |