Registry Ligand-Gated Ion Channel database Deprecated

The Ligand-Gated Ion Channel database provides nucleic and proteic sequences of the subunits of ligand-gated ion channels. These transmembrane proteins can exist under different conformations, at least one of which forms a pore through the membrane connecting two neighbouring compartments. The database can be used to generate multiple sequence alignments from selected subunits, and gives the atomic coordinates of subunits, or portion of subunits, where available.


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gene protein sequence
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Pattern for Local Unique Identifiers

Local identifiers in Ligand-Gated Ion Channel database should match this regular expression:

Example Local Unique Identifier
5HT3Arano   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Ligand-Gated Ion Channel database should match this regular expression:

Example CURIE
1999 The Ligand Gated Ion Channel Database.
Metaregistry Ligand-Gated Ion Channel database

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for lgic with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext LGIC logo miriam lgic
Name-to-Thing Name-to-Thing logo n2t lgic
Prefix Commons prefixcommons lgicdb

Providers are various services that resolve CURIEs to URLs. The example CURIE lgic:5HT3Arano is used to demonstrate the provides available for lgic. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Ligand-Gated Ion Channel database lgic
Bioregistry bioregistry miriam
Name-to-Thing n2t