IMGT, the international ImMunoGeneTics project, is a collection of high-quality integrated databases specialising in Immunoglobulins, T cell receptors and the Major Histocompatibility Complex (MHC) of all vertebrate species. IMGT/HLA is a database for sequences of the human MHC, referred to as HLA. It includes all the official sequences for the WHO Nomenclature Committee For Factors of the HLA System. This collection references allele information through the WHO nomenclature.
imgt.hla
Local identifiers in IMGT/HLA human major histocompatibility complex sequence database should match this
regular expression:
^[A-Z0-9*:]+$
Compact URIs (CURIEs) constructed from IMGT/HLA human major histocompatibility complex sequence database should match
this regular expression:
^imgt\.hla:[A-Z0-9*:]+$
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for this resource with 9 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
IMGT.HLA
|
|
Cellosaurus | cellosaurus |
IPD-IMGT/HLA
|
|
EDAM | edam |
2773
|
|
FAIRSharing | fairsharing |
FAIRsharing.e28v7g
|
|
GO | go |
IMGT_HLA
|
|
Integbio | integbio |
nbdc00106
|
|
Identifiers.org | miriam |
imgt.hla
|
|
N2T | n2t |
imgt.hla
|
|
NCBI | ncbi |
IMGT/HLA
|
|
Prefix Commons | prefixcommons |
imgthla
|
|
re3data | re3data |
r3d100010804
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier A*01:01:01:01
is used to demonstrate the providers
available for IMGT/HLA human major histocompatibility complex sequence database. A guide for curating additional providers can be found
here.
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/imgthla:A*01:01:01:01 |