Bioregistry - EcoCyc

Registry EcoCyc

EcoCyc is a scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc project performs literature-based curation of its genome, and of transcriptional regulation, transporters, and metabolic pathways.

Prefix: ecocyc
Links: Homepage
Contact: Missing Contact
Pattern for Local Unique Identifiers: Missing LUI pattern
Example Local Unique Identifier: AICARTRANSIMPCYCLO-CPLX Resolve
Pattern for CURIES: Could not construct CURIE oattern
Example CURIE: ecocyc:AICARTRANSIMPCYCLO-CPLX

Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for ecocyc.

Registry Name	Metaprefix	External Prefix
Gene Ontology Registry	`go`	`EcoCyc`
National Center for Biotechnology Information Registry	`ncbi`	`ECOCYC`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ecocyc:AICARTRANSIMPCYCLO-CPLX is used to demonstrate the provides available for ecocyc. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
EcoCyc	`ecocyc`	https://biocyc.org/gene?id=AICARTRANSIMPCYCLO-CPLX
Bioregistry	`bioregistry`	https://bioregistry.io/ecocyc:AICARTRANSIMPCYCLO-CPLX