Registry EcoCyc
EcoCyc is a scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc project performs literature-based curation of its genome, and of transcriptional regulation, transporters, and metabolic pathways.
- Prefix
ecocyc- Keywords
- biology
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- AICARTRANSIMPCYCLO-CPLX Resolve
- Pattern for CURIES
- Could not construct CURIE pattern
- Example CURIE
- ecocyc:AICARTRANSIMPCYCLO-CPLX
- Publications
Metaregistry EcoCyc
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for ecocyc with
3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
FAIRSharing
|
fairsharing |
FAIRsharing.65dmtr
|
|
| Gene Ontology Registry | go |
EcoCyc
|
|
| National Center for Biotechnology Information Registry | ncbi |
ECOCYC
|
|
| Registry of Research Data Repositories | re3data |
r3d100011277
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
ecocyc:AICARTRANSIMPCYCLO-CPLX
is used to demonstrate the provides available for
ecocyc. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| EcoCyc | ecocyc |
https://biocyc.org/gene?id=AICARTRANSIMPCYCLO-CPLX |
| Bioregistry | bioregistry |
https://bioregistry.io/ecocyc:AICARTRANSIMPCYCLO-CPLX |