EcoCyc is a scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc project performs literature-based curation of its genome, and of transcriptional regulation, transporters, and metabolic pathways.

Prefix
ecocyc
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
AICARTRANSIMPCYCLO-CPLX   Resolve
Pattern for CURIES
Could not construct CURIE pattern
Example CURIE
ecocyc:AICARTRANSIMPCYCLO-CPLX
Metaregistry EcoCyc

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for ecocyc with 2 unique external prefixes.

Registry Name Metaprefix External Prefix
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.65dmtr
Gene Ontology Registry go EcoCyc
National Center for Biotechnology Information Registry ncbi ECOCYC
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ecocyc:AICARTRANSIMPCYCLO-CPLX is used to demonstrate the provides available for ecocyc. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
EcoCyc ecocyc https://biocyc.org/gene?id=AICARTRANSIMPCYCLO-CPLX
Bioregistry bioregistry https://bioregistry.io/ecocyc:AICARTRANSIMPCYCLO-CPLX