InterPro is a database of protein families, domains and functional sites in which identifiable features found in known proteins can be applied to unknown protein sequences.

Preferred Prefix
Alternative Prefixes
IPR IP InterPro
bioinformatics biology domain obo ontology protein
Homepage Repository @InterProDB
InterPro Help
Pattern for Local Unique Identifiers

Local identifiers in InterPro should match this regular expression:

Example Local Unique Identifier
IPR016380   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from InterPro should match this regular expression:

Example CURIE

A summary of the relations in the Bioregistry schema can be found here.

In Collection
Global Biodata Coalition - Global Core Biodata Resources
Metaregistry InterPro

The metaregistry provides mappings between the Bioregistry and other registries. There are 15 mappings to external registries for this resource with 8 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext IPR
Biolink Biolink Model Registry logo biolink interpro
EDAM EDAM Ontology logo edam 1133
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.pda11d
GO Gene Ontology Registry logo go InterPro
Integbio Integbio logo integbio nbdc00108 logo miriam interpro
N2T Name-to-Thing logo n2t interpro
NCBI National Center for Biotechnology Information Registry logo ncbi InterPro
OBO Foundry OBO Foundry logo obofoundry ipr
Prefix Commons Prefix Commons logo prefixcommons interpro
re3data Registry of Research Data Repositories logo re3data r3d100010798
TogoID togoid Interpro
UniProt UniProt Cross-ref database logo uniprot DB-0052
Wikidata Wikidata Property logo wikidata P2926
RDF Information

When using this resource in RDF, the following URI format should be used:$1


Providers are various services that resolve CURIEs to URLs. The example CURIE interpro:IPR016380 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
InterPro interpro
InterPro (RDF) rdf
Bioregistry bioregistry miriam
OBO Foundry obofoundry
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF