InterPro is a database of protein families, domains and functional sites in which identifiable features found in known proteins can be applied to unknown protein sequences.
interpro
interpro
Local identifiers in InterPro should match this
regular expression:
^IPR\d{6}$
Compact URIs (CURIEs) constructed from InterPro should match
this regular expression:
^interpro:IPR\d{6}$
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 13 mappings to external registries for this resource with 7 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
IPR
|
|
Biolink
|
biolink |
interpro
|
|
EDAM
|
edam |
1133
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.pda11d
|
|
GO
![]() |
go |
InterPro
|
|
Identifiers.org
![]() |
miriam |
interpro
|
|
N2T
![]() |
n2t |
interpro
|
|
NCBI
|
ncbi |
InterPro
|
|
OBO Foundry
![]() |
obofoundry |
ipr
|
|
Prefix Commons
|
prefixcommons |
interpro
|
|
re3data
![]() |
re3data |
r3d100010798
|
|
UniProt
|
uniprot |
DB-0052
|
|
Wikidata
|
wikidata |
P2926
|
When using this resource in RDF, the following URI format should be used:
http://purl.obolibrary.org/obo/IPR_$1
Providers are various services that resolve CURIEs to URLs. The example CURIE
interpro:IPR016380
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW |
Bio2RDF | http://interpro.bio2rdf.org/describe/?url=http://bio2rdf.org/interpro:IPR016380 |
bio2rdf |
Bio2RDF | http://bio2rdf.org/interpro:IPR016380 |