Registry Saccharomyces Genome Database

The Saccharomyces Genome Database (SGD) project collects information and maintains a database of the molecular biology of the yeast Saccharomyces cerevisiae.

Prefix
sgd
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Saccharomyces Genome Database should match this regular expression:
^((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$

Example Local Unique Identifier
S000002493   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Saccharomyces Genome Database should match this regular expression:
^sgd:((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$

Example CURIE
sgd:S000002493
References
Metaregistry Saccharomyces Genome Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for sgd.

Registry Name Metaprefix External Prefix
BioContext biocontext SGD
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.pzvw40
Gene Ontology Registry go SGD
Identifiers.org Identifiers.org logo miriam sgd
Name-to-Thing Name-to-Thing logo n2t sgd
National Center for Biotechnology Information Registry ncbi SGD
Prefix Commons prefixcommons sgd
UniProt Cross-ref database uniprot SGD
Wikidata Property Wikidata Property logo wikidata P3406
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE sgd: is used to demonstrate the provides available for sgd. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Saccharomyces Genome Database sgd https://www.yeastgenome.org/locus/S000002493
Bioregistry bioregistry https://bioregistry.io/sgd:S000002493
Identifiers.org miriam https://identifiers.org/sgd:S000002493
Name-to-Thing n2t https://n2t.net/sgd:S000002493
None CURATOR_REVIEW http://sgd.bio2rdf.org/describe/?url=http://bio2rdf.org/sgd:S000002493
None bioentitylink https://bioentity.link/#/lexicon/public/S000002493
None agr https://www.alliancegenome.org/gene/SGD:S000002493
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
CURATOR_REVIEW Bio2RDF http://sgd.bio2rdf.org/describe/?url=http://bio2rdf.org/sgd:S000002493
bioentitylink SGD through BioEntity Link https://bioentity.link/#/lexicon/public/S000002493
agr SGD through the Alliance of Genome Resources https://www.alliancegenome.org/gene/SGD:S000002493