The Saccharomyces Genome Database (SGD) project collects information and maintains a database of the molecular biology of the yeast Saccharomyces cerevisiae.
sgd
Local identifiers in Saccharomyces Genome Database should match this
regular expression:
^((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$
Compact URIs (CURIEs) constructed from Saccharomyces Genome Database should match
this regular expression:
^sgd:((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$
The metaregistry provides mappings between the Bioregistry and other registries. There are
11 mappings to external registries for sgd
with
6 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
SGD
|
|
EDAM Ontology | edam |
2632
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.pzvw40
|
|
Gene Ontology Registry | go |
SGD
|
|
Identifiers.org
![]() |
miriam |
sgd
|
|
Name-to-Thing
![]() |
n2t |
sgd
|
|
National Center for Biotechnology Information Registry | ncbi |
SGD
|
|
Prefix Commons | prefixcommons |
sgd
|
|
Registry of Research Data Repositories | re3data |
r3d100010419
|
|
UniProt Cross-ref database | uniprot |
DB-0095
|
|
Wikidata Property
|
wikidata |
P3406
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
sgd:S000002493
is used to demonstrate the provides available for
sgd
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Saccharomyces Genome Database | sgd |
https://www.yeastgenome.org/locus/S000002493 |
Bioregistry | bioregistry |
https://bioregistry.io/sgd:S000002493 |
Identifiers.org | miriam |
https://identifiers.org/sgd:S000002493 |
Name-to-Thing | n2t |
https://n2t.net/sgd:S000002493 |
None | CURATOR_REVIEW |
http://sgd.bio2rdf.org/describe/?url=http://bio2rdf.org/sgd:S000002493 |
None | agr |
https://www.alliancegenome.org/gene/SGD:S000002493 |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW |
Bio2RDF | http://sgd.bio2rdf.org/describe/?url=http://bio2rdf.org/sgd:S000002493 |
agr |
SGD through the Alliance of Genome Resources | https://www.alliancegenome.org/gene/SGD:S000002493 |