Registry CATH Protein Structural Domain Superfamily

CATH is a classification of protein structural domains. We group protein domains into superfamilies when there is sufficient evidence they have diverged from a common ancestor. CATH can be used to predict structural and functional information directly from protein sequence.

Prefix
cath
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in CATH Protein Structural Domain Superfamily should match this regular expression:
^[1-6]\.[0-9]+\.[0-9]+\.[0-9]+$

Example Local Unique Identifier
1.10.8.10   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from CATH Protein Structural Domain Superfamily should match this regular expression:
^cath:[1-6]\.[0-9]+\.[0-9]+\.[0-9]+$

Example CURIE
cath:1.10.8.10
Publications
1997 CATH--a hierarchic classification of protein domain structures.
Ontology
Metaregistry CATH Protein Structural Domain Superfamily

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for cath with 4 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext CATH
EDAM Ontology edam 2700
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.xgcyyn
Identifiers.org Identifiers.org logo miriam cath
Name-to-Thing Name-to-Thing logo n2t cath
Prefix Commons prefixcommons cath
Registry of Research Data Repositories re3data r3d100012629
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE cath:1.10.8.10 is used to demonstrate the provides available for cath. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
CATH Protein Structural Domain Superfamily cath http://www.cathdb.info/cathnode/1.10.8.10
Bioregistry bioregistry https://bioregistry.io/cath:1.10.8.10
Identifiers.org miriam https://identifiers.org/cath:1.10.8.10
Name-to-Thing n2t https://n2t.net/cath:1.10.8.10