The Consensus CDS (CCDS) project is a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The CCDS set is calculated following coordinated whole genome annotation updates carried out by the NCBI, WTSI, and Ensembl. The long term goal is to support convergence towards a standard set of gene annotations.

Prefix

ccds

Keywords

gene life science protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Consensus CDS should match this regular expression:
^CCDS\d+\.\d+$

Example Local Unique Identifier

CCDS13573.1   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Consensus CDS should match this regular expression:
^ccds:CCDS\d+\.\d+$

Example CURIE

ccds:CCDS13573.1

Publications

2009 The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE None:CCDS13573.1 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.