The Consensus CDS (CCDS) project is a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The CCDS set is calculated following coordinated whole genome annotation updates carried out by the NCBI, WTSI, and Ensembl. The long term goal is to support convergence towards a standard set of gene annotations.

Prefix
ccds
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Consensus CDS should match this regular expression:
^CCDS\d+\.\d+$

Example Local Unique Identifier
CCDS13573.1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Consensus CDS should match this regular expression:
^ccds:CCDS\d+\.\d+$

Example CURIE
ccds:CCDS13573.1
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for ccds.

Registry Name Metaprefix External Prefix
Identifiers.org miriam ccds
Name-to-Thing n2t ccds
Prefix Commons prefixcommons CCDS
UniProt Cross-ref database uniprot CCDS
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ccds:CCDS13573.1 is used to demonstrate the provides available for ccds. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Consensus CDS ccds http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi?REQUEST=CCDS&DATA=CCDS13573.1
Bioregistry bioregistry https://bioregistry.io/ccds:CCDS13573.1
Identifiers.org miriam https://identifiers.org/ccds:CCDS13573.1
Name-to-Thing n2t https://n2t.net/ccds:CCDS13573.1