Registry Feature Annotation Location Description Ontology

It is a simple ontology to describe sequence feature positions and regions as found in GFF3, DBBJ, EMBL, GenBank files, UniProt, and many other bioinformatics resources

binding site gene feature genetics geography nucleic acid sequence ontology sequence annotation sequence feature
Homepage Repository OWL
FALDO group
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
ForwardStrandPosition   Resolve
Example CURIE
2016 FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation

A summary of the relations in the Bioregistry schema can be found here.

In Collection
Semantic Web Context
Metaregistry Feature Annotation Location Description Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl FALDO
AgroPortal AgroPortal logo agroportal FALDO
BioContext biocontext faldo
BioPortal BioPortal Prefixes logo bioportal FALDO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.haxp7g
LOV Linked Open Vocabularies logo lov faldo

Providers are various services that resolve CURIEs to URLs. The example CURIE faldo:ForwardStrandPosition is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Feature Annotation Location Description Ontology faldo
Bioregistry bioregistry