Registry Feature Annotation Location Description Ontology

It is a simple ontology to describe sequence feature positions and regions as found in GFF3, DBBJ, EMBL, GenBank files, UniProt, and many other bioinformatics resources

Prefix
faldo
Links
Homepage OWL
Contact
FALDO group
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
ForwardStrandPosition   Resolve
Pattern for CURIES
Could not construct CURIE pattern
Example CURIE
faldo:ForwardStrandPosition
Publications
2016 FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation.
Contributors
Metaregistry Feature Annotation Location Description Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for faldo with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL aberowl FALDO
AgroPortal agroportal FALDO
BioContext biocontext faldo
BioPortal Prefixes bioportal FALDO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.haxp7g
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE faldo:ForwardStrandPosition is used to demonstrate the provides available for faldo. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Feature Annotation Location Description Ontology faldo http://biohackathon.org/resource/faldo#ForwardStrandPosition
Bioregistry bioregistry https://bioregistry.io/faldo:ForwardStrandPosition