Registry GeneFarm
GeneFarm is a database whose purpose is to store traceable annotations for Arabidopsis nuclear genes and gene products.
- Prefix
genefarm- Keywords
- expression genome life science nucleotide sequence
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in GeneFarm should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 4892 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from GeneFarm should match this regular expression:
^genefarm:\d+$ - Example CURIE
- genefarm:4892
- Publications
- 2005 GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts.
Metaregistry GeneFarm
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for genefarm with
2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
GENEFARM
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.2mayq0
|
|
Identifiers.org
|
miriam |
genefarm
|
|
N2T
|
n2t |
genefarm
|
|
Prefix Commons
|
prefixcommons |
genefarm
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
genefarm:4892
is used to demonstrate the provides available for
genefarm. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| GeneFarm | genefarm |
https://urgi.versailles.inra.fr/Genefarm/Gene/display_gene.htpl?GENE_ID=4892 |
| Bioregistry | bioregistry |
https://bioregistry.io/genefarm:4892 |
| Identifiers.org | miriam |
https://identifiers.org/genefarm:4892 |
| Name-to-Thing | n2t |
https://n2t.net/genefarm:4892 |
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/genefarm:4892 |