GiardiaDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Prefix
giardiadb
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in GiardiaDB should match this regular expression:
^\w+$

Example Local Unique Identifier
GL50803_102438   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GiardiaDB should match this regular expression:
^giardiadb:\w+$

Example CURIE
giardiadb:GL50803_102438
Publications
2008 GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis.
Metaregistry GiardiaDB

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for giardiadb with 3 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext GIARDIADB
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.e7skwg
Identifiers.org Identifiers.org logo miriam giardiadb
Name-to-Thing Name-to-Thing logo n2t giardiadb
Prefix Commons prefixcommons giardiadb
Registry of Research Data Repositories re3data r3d100012458
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE giardiadb:GL50803_102438 is used to demonstrate the provides available for giardiadb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
GiardiaDB giardiadb https://giardiadb.org/giardiadb/app/record/gene/GL50803_102438
Bioregistry bioregistry https://bioregistry.io/giardiadb:GL50803_102438
Identifiers.org miriam https://identifiers.org/giardiadb:GL50803_102438
Name-to-Thing n2t https://n2t.net/giardiadb:GL50803_102438