GiardiaDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Prefix

giardiadb

Keywords

eukaryotic genome genomics

Links

Homepage @EuPathDB

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in GiardiaDB should match this regular expression:
^\w+$

Example Local Unique Identifier

GL50803_102438   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from GiardiaDB should match this regular expression:
^giardiadb:\w+$

Example CURIE

giardiadb:GL50803_102438

Publications

2008 GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis.

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for giardiadb with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE giardiadb:GL50803_102438 is used to demonstrate the provides available for giardiadb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.