The dbSNP database is a repository for both single base nucleotide subsitutions and short deletion and insertion polymorphisms.

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Pattern for Local Unique Identifiers

Local identifiers in dbSNP Reference SNP number should match this regular expression:

Example Local Unique Identifier
rs121909098   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from dbSNP Reference SNP number should match this regular expression:

Example CURIE
Metaregistry dbSNP Reference SNP number

The metaregistry provides mappings between the Bioregistry and other registries. There are 13 mappings to external registries for this resource with 7 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext dbSNP
Cellosaurus Cellosaurus Registry logo cellosaurus dbSNP
EDAM EDAM Ontology logo edam 1106
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.edxb58
GO Gene Ontology Registry logo go dbSNP
HL7 HL7 External Code Systems logo hl7 2.16.840.1.113883.6.284 logo miriam dbsnp
N2T Name-to-Thing logo n2t dbsnp
NCBI National Center for Biotechnology Information Registry logo ncbi dbSNP
Prefix Commons Prefix Commons logo prefixcommons dbsnp
re3data Registry of Research Data Repositories logo re3data r3d100010652
UniProt UniProt Cross-ref database logo uniprot DB-0013
Wikidata Wikidata Property logo wikidata P6861

Providers are various services that resolve CURIEs to URLs. The example CURIE None:rs121909098 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
dbSNP Reference SNP number dbsnp
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF