The dbSNP database is a repository for both single base nucleotide subsitutions and short deletion and insertion polymorphisms.

genome life science
Homepage Repository
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in dbSNP Reference SNP number should match this regular expression:

Example Local Unique Identifier
rs121909098   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from dbSNP Reference SNP number should match this regular expression:

Example CURIE

A summary of the relations in the Bioregistry schema can be found here.

Provided By
In Collection
FHIR External Terminologies
Metaregistry dbSNP Reference SNP number

The metaregistry provides mappings between the Bioregistry and other registries. There are 15 mappings to external registries for this resource with 8 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext dbSNP
Cellosaurus Cellosaurus Registry logo cellosaurus dbSNP
EDAM EDAM Ontology logo edam 1106
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.edxb58
GO Gene Ontology Registry logo go dbSNP
HL7 HL7 External Code Systems logo hl7 2.16.840.1.113883.6.284
Integbio Integbio logo integbio nbdc00206 logo miriam dbsnp
N2T Name-to-Thing logo n2t dbsnp
NCBI National Center for Biotechnology Information Registry logo ncbi dbSNP
Prefix Commons Prefix Commons logo prefixcommons dbsnp
re3data Registry of Research Data Repositories logo re3data r3d100010652
TogoID togoid Dbsnp
UniProt UniProt Cross-ref database logo uniprot DB-0013
Wikidata Wikidata Property logo wikidata P6861

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier rs121909098 is used to demonstrate the providers available for dbSNP Reference SNP number. A guide for curating additional providers can be found here.

Name Metaprefix URI
dbSNP Reference SNP number dbsnp
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF