Registry Conserved Domain Database at NCBI

The Conserved Domain Database (CDD) is a collection of multiple sequence alignments and derived database search models, which represent protein domains conserved in molecular evolution.

Prefix
cdd
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Conserved Domain Database at NCBI should match this regular expression:
^(cd)?\d{5}$

Example Local Unique Identifier
cd00400   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Conserved Domain Database at NCBI should match this regular expression:
^cdd:(cd)?\d{5}$

Example CURIE
cdd:cd00400
Publications
2008 CDD: specific functional annotation with the Conserved Domain Database.
Metaregistry Conserved Domain Database at NCBI

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for cdd with 3 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext CDD
EDAM Ontology edam 2666
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.ea287c
Gene Ontology Registry go CDD
Identifiers.org Identifiers.org logo miriam cdd
Name-to-Thing Name-to-Thing logo n2t cdd
National Center for Biotechnology Information Registry ncbi CDD
Prefix Commons prefixcommons cdd
UniProt Cross-ref database uniprot CDD
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE cdd:cd00400 is used to demonstrate the provides available for cdd. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Conserved Domain Database at NCBI cdd https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00400
Bioregistry bioregistry https://bioregistry.io/cdd:cd00400
Identifiers.org miriam https://identifiers.org/cdd:cd00400
Name-to-Thing n2t https://n2t.net/cdd:cd00400