The Conserved Domain Database (CDD) is a collection of multiple sequence alignments and derived database search models, which represent protein domains conserved in molecular evolution.

earth science geology protein structure
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Conserved Domain Database at NCBI should match this regular expression:

Example Local Unique Identifier
cd00400   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Conserved Domain Database at NCBI should match this regular expression:

Example CURIE
Metaregistry Conserved Domain Database at NCBI

The metaregistry provides mappings between the Bioregistry and other registries. There are 11 mappings to external registries for this resource with 6 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext CDD
EDAM EDAM Ontology logo edam 2666
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.ea287c
GO Gene Ontology Registry logo go CDD
Integbio Integbio logo integbio nbdc00401 logo miriam cdd
N2T Name-to-Thing logo n2t cdd
NCBI National Center for Biotechnology Information Registry logo ncbi CDD
Prefix Commons Prefix Commons logo prefixcommons cdd
re3data Registry of Research Data Repositories logo re3data r3d100012041
UniProt UniProt Cross-ref database logo uniprot DB-0214

Providers are various services that resolve CURIEs to URLs. The example CURIE cdd:cd00400 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Conserved Domain Database at NCBI cdd
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF