The Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters, for which the transcription start site has been determined experimentally. Access to promoter sequences is provided by pointers to positions in nucleotide sequence entries. The annotation part of an entry includes description of the initiation site mapping data, cross-references to other databases, and bibliographic references. EPD is structured in a way that facilitates dynamic extraction of biologically meaningful promoter subsets for comparative sequence analysis.
Local identifiers in Eukaryotic Promoter Database should match this
Compact URIs (CURIEs) constructed from Eukaryotic Promoter Database should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for
|Registry Name||Metaprefix||External Prefix|
|National Center for Biotechnology Information Registry||
|UniProt Cross-ref database||
Providers are various services that resolve CURIEs to URLs. The example CURIE
epd:TA_H3 is used to demonstrate the provides available for
epd. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
|Eukaryotic Promoter Database||