HSSP (homology-derived structures of proteins) is a derived database merging structural (2-D and 3-D) and sequence information (1-D). For each protein of known 3D structure from the Protein Data Bank, the database has a file with all sequence homologues, properly aligned to the PDB protein.
Local identifiers in Database of homology-derived secondary structure of proteins should match this
Compact URIs (CURIEs) constructed from Database of homology-derived secondary structure of proteins should match
this regular expression:
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for
|Registry Name||Metaprefix||External Prefix|
|National Center for Biotechnology Information Registry||
Providers are various services that resolve CURIEs to URLs. The example CURIE
hssp:102l is used to demonstrate the provides available for
hssp. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
|Database of homology-derived secondary structure of proteins||
Additional providers curated in the Bioregistry are listed here.
|CURATOR_REVIEW||HSSP at CMBI||ftp://ftp.cmbi.ru.nl/pub/molbio/data/hssp/102l.hssp.bz2|