TriTrypDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Prefix

tritrypdb

Keywords

comparative genomics genomics infectious disease medicine

Links

Homepage @VEuPathDB

Contact

Omar Harb   0000-0003-4446-6200

Pattern for Local Unique Identifiers

Local identifiers in TriTrypDB should match this regular expression:
^\w+(\.)?\w+(\.)?\w+$

Example Local Unique Identifier

Tb927.8.620   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from TriTrypDB should match this regular expression:
^tritrypdb:\w+(\.)?\w+(\.)?\w+$

Example CURIE

tritrypdb:Tb927.8.620

Publications

2009 TriTrypDB: a functional genomic resource for the Trypanosomatidae

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE tritrypdb:Tb927.8.620 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.