Registry NCBI Protein
The Protein database is a collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
- Prefix
ncbiprotein- Preferred Prefix
NCBIProtein- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in NCBI Protein should match this regular expression:
^(\w+\d+(\.\d+)?)|(NP_\d+)$ - Example Local Unique Identifier
- CAA71118.1 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from NCBI Protein should match this regular expression:
^ncbiprotein:(\w+\d+(\.\d+)?)|(NP_\d+)$ - Example CURIE
- ncbiprotein:CAA71118.1
Metaregistry NCBI Protein
The metaregistry provides mappings between the Bioregistry and other registries. There are
6 mappings to external registries for ncbiprotein with
4 unique external prefixes.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| BioContext | biocontext |
NCBIProtein
|
| Gene Ontology Registry | go |
NCBI_NP
|
Identifiers.org
|
miriam |
ncbiprotein
|
Name-to-Thing
|
n2t |
ncbiprotein
|
| Prefix Commons | prefixcommons |
ncbi.protein
|
| Registry of Research Data Repositories | re3data |
r3d100010776
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
ncbiprotein:CAA71118.1
is used to demonstrate the provides available for
ncbiprotein. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| NCBI Protein | ncbiprotein |
https://www.ncbi.nlm.nih.gov/protein/CAA71118.1 |
| Bioregistry | bioregistry |
https://bioregistry.io/ncbiprotein:CAA71118.1 |
| Identifiers.org | miriam |
https://identifiers.org/ncbiprotein:CAA71118.1 |
| Name-to-Thing | n2t |
https://n2t.net/ncbiprotein:CAA71118.1 |