The Protein database is a collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
ncbiprotein
NCBIProtein
Local identifiers in NCBI Protein should match this
regular expression:
^(\w+\d+(\.\d+)?)|(NP_\d+)$
Compact URIs (CURIEs) constructed from NCBI Protein should match
this regular expression:
^ncbiprotein:(\w+\d+(\.\d+)?)|(NP_\d+)$
The metaregistry provides mappings between the Bioregistry and other registries. There are
6 mappings to external registries for ncbiprotein
with
4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
NCBIProtein
|
|
Gene Ontology Registry | go |
NCBI_NP
|
|
Identifiers.org
![]() |
miriam |
ncbiprotein
|
|
Name-to-Thing
![]() |
n2t |
ncbiprotein
|
|
Prefix Commons | prefixcommons |
ncbi.protein
|
|
Registry of Research Data Repositories | re3data |
r3d100010776
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
ncbiprotein:CAA71118.1
is used to demonstrate the provides available for
ncbiprotein
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
NCBI Protein | ncbiprotein |
https://www.ncbi.nlm.nih.gov/protein/CAA71118.1 |
Bioregistry | bioregistry |
https://bioregistry.io/ncbiprotein:CAA71118.1 |
Identifiers.org | miriam |
https://identifiers.org/ncbiprotein:CAA71118.1 |
Name-to-Thing | n2t |
https://n2t.net/ncbiprotein:CAA71118.1 |