Entrez Gene is the NCBI's database for gene-specific information, focusing on completely sequenced genomes, those with an active research community to contribute gene-specific information, or those that are scheduled for intense sequence analysis.

Preferred Prefix
Alternative Prefixes
NCBIGene EntrezGene EGID entrez gene/locuslink entrez
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Entrez Gene should match this regular expression:

Example Local Unique Identifier
100010   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Entrez Gene should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for ncbigene.

Registry Name Metaprefix External Prefix
Biolink Model Registry biolink NCBIGene
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.5h3maw
Gene Ontology Registry go NCBIGene
Identifiers.org Identifiers.org logo miriam ncbigene
Name-to-Thing Name-to-Thing logo n2t ncbigene
National Center for Biotechnology Information Registry ncbi GeneID
Prefix Commons prefixcommons NCBIGene
Scholia scholia ncbi-gene
Wikidata Property Wikidata Property logo wikidata P351

Providers are various services that resolve CURIEs to URLs. The example CURIE ncbigene:100010 is used to demonstrate the provides available for ncbigene. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Entrez Gene ncbigene https://www.ncbi.nlm.nih.gov/gene/100010
Bioregistry bioregistry https://bioregistry.io/ncbigene:100010
Identifiers.org miriam https://identifiers.org/ncbigene:100010
Name-to-Thing n2t https://n2t.net/ncbigene:100010
Scholia scholia https://scholia.toolforge.org/ncbi-gene/100010
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
marrvel Model organism Aggregated Resources for Rare Variant ExpLoration http://marrvel.org/model/gene/100010
CURATOR_REVIEW Bio2RDF http://ncbigene.bio2rdf.org/describe/?url=http://bio2rdf.org/ncbigene:100010