The Nucleotide database is a collection of sequences from several sources, including GenBank, RefSeq, TPA and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery.

Prefix
nucleotide
Links
Homepage
Contact
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Pattern for Local Unique Identifiers

Local identifiers in Nucleotide should match this regular expression:
^[a-zA-Z0-9_\.]+$

Example Local Unique Identifier
880798137   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Nucleotide should match this regular expression:
^nucleotide:[a-zA-Z0-9_\.]+$

Example CURIE
nucleotide:880798137
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for nucleotide.

Registry Name Metaprefix External Prefix
Identifiers.org miriam nucleotide
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE nucleotide:880798137 is used to demonstrate the provides available for nucleotide. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Nucleotide nucleotide https://www.ncbi.nlm.nih.gov/nuccore/880798137
Bioregistry bioregistry https://bioregistry.io/nucleotide:880798137
Identifiers.org miriam https://identifiers.org/nucleotide:880798137