The tRNA Gene DataBase Curated by Experts "tRNADB-CE" was constructed by analyzing 927 complete and 1301 draft genomes of Bacteria and Archaea, 171 complete virus genomes, 121 complete chloroplast genomes, 12 complete eukaryote (Plant and Fungi) genomes and approximately 230 million DNA sequence entries that originated from environmental metagenomic clones.

This resource is proprietary. This means that it is not freely and publicly available without restriction. Such resources are still valuable to include in the Bioregistry as they may appear in other non-proprietary resources.

Comment

requires authentication to access

Prefix
trnadbce
Keywords
dna gene genome rna
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
265912   Resolve
Example CURIE
trnadbce:265912
Reviewer
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Metaregistry tRNA Gene Database

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
Integbio Integbio logo integbio nbdc00720
Prefix Commons Prefix Commons logo prefixcommons trnadbce
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE trnadbce:265912 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
tRNA Gene Database trnadbce http://trna.nagahama-i-bio.ac.jp/cgi-bin/trnadb/whole_detail.cgi?SID=265912
Bioregistry bioregistry https://bioregistry.io/trnadbce:265912
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/trnadbce:265912