The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences.

Prefix

insdc

Keywords

dna

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Nucleotide Sequence Database should match this regular expression:
^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4,6}\d{8,10}|[A-J][A-Z]{2}\d{5})(\.\d+)?$

Example Local Unique Identifier

X58356   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Nucleotide Sequence Database should match this regular expression:
^insdc:([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4,6}\d{8,10}|[A-J][A-Z]{2}\d{5})(\.\d+)?$

Example CURIE

insdc:X58356

Publications

• 1990 Recent changes in the GenBank On-line Service
• 2007 GenBank
• 2006 EMBL Nucleotide Sequence Database in 2006
• 2002 Nucleotide sequence database policies

A summary of the relations in the Bioregistry schema can be found here.

Has incoming URI collisions

The following resources share a URI format string with insdc:
nucleotide

When generating an extended prefix map, their respective CURIE prefixes and URI prefixes are merged into the record for insdc. If you believe that these are distinct semantic spaces and should not be merged, please open a new issue on the Bioregistry issue tracker for discussion.

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE insdc:X58356 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.