A 16S rRNA gene database which provides chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies.
greengenes
Local identifiers in 16S rRNA gene database should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from 16S rRNA gene database should match
this regular expression:
^greengenes:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
7 mappings to external registries for greengenes
with
3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
GREENGENES
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.bpxgb6
|
|
Identifiers.org
![]() |
miriam |
greengenes
|
|
Name-to-Thing
![]() |
n2t |
greengenes
|
|
National Center for Biotechnology Information Registry | ncbi |
Greengenes
|
|
Prefix Commons | prefixcommons |
greengenes
|
|
Registry of Research Data Repositories | re3data |
r3d100010549
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
greengenes:100000
is used to demonstrate the provides available for
greengenes
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.