Ligand Expo is a data resource for finding information about small molecules bound to proteins and nucleic acids.

Prefix
ligandexpo
Keywords
chemical interaction life science nucleic acid protein structure
Links
Homepage
Contact
John Westbrook   0000-0002-6686-5475
Pattern for Local Unique Identifiers

Local identifiers in Ligand Expo should match this regular expression:
^(\w){3}$

Example Local Unique Identifier
ABC   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Ligand Expo should match this regular expression:
^ligandexpo:(\w){3}$

Example CURIE
ligandexpo:ABC
Publications
2004 Ligand Depot: a data warehouse for ligands bound to macromolecules
Metaregistry Ligand Expo

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext LIGANDEXPO
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.2ma4gq
Integbio Integbio logo integbio nbdc01864
Identifiers.org Identifiers.org logo miriam ligandexpo
N2T Name-to-Thing logo n2t ligandexpo
Pathguide Pathguide logo pathguide 154
Prefix Commons Prefix Commons logo prefixcommons ligandexpo
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ligandexpo:ABC is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Ligand Expo ligandexpo http://ligand-depot.rutgers.edu/pyapps/ldHandler.py?formid=cc-index-search&target=ABC&operation=ccid
Bioregistry bioregistry https://bioregistry.io/ligandexpo:ABC
Identifiers.org miriam https://identifiers.org/ligandexpo:ABC
Name-to-Thing n2t https://n2t.net/ligandexpo:ABC
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
CURATOR_REVIEW Ligand Expo at Rutgers http://ligand-expo.rcsb.org/pyapps/ldHandler.py?formid=cc-index-search&target=ABC&operation=ccid
bio2rdf Bio2RDF http://bio2rdf.org/ligandexpo:ABC