GenBank ® is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences (Nucleic Acids Research, 2013 Jan;41(D1):D36-42).

Prefix
genbank
Keywords
bioinformatics data management dna epidemiology functional genomics genomics metagenomics transcriptomics virology
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
U49845   Resolve
Example CURIE
genbank:U49845
Publications
Contributors
Ontology
Canonical For (1)
ncbigi
Metaregistry GenBank

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for genbank with 6 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GenBank
CHEMINF cheminf 000304
EDAM EDAM Ontology logo edam 2292
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.9kahy4
GO Gene Ontology Registry logo go GenBank
Prefix Commons Prefix Commons logo prefixcommons genbank
re3data Registry of Research Data Repositories logo re3data r3d100010528
UniProt UniProt Cross-ref database logo uniprot DB-0028
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE genbank:U49845 is used to demonstrate the provides available for genbank. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
GenBank genbank https://www.ncbi.nlm.nih.gov/nucleotide/U49845
Bioregistry bioregistry https://bioregistry.io/genbank:U49845
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/genbank:U49845