The Mouse Genome Database (MGD) project includes data on gene characterization, nomenclature, mapping, gene homologies among mammals, sequence links, phenotypes, allelic variants and mutants, and strain data.
mgi
MGI
Local identifiers in Mouse Genome Informatics should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from Mouse Genome Informatics should match
this regular expression:
^MGI:\d+$
namespaceEmbeddedInLUI
as true.
This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known
as a banana)
and therefore look like a CURIE. For Mouse Genome Informatics, the banana looks like
MGI:
.
Therefore, you may see local unique identifiers for this resource that look like
MGI:6017782
(instead of the canonical form 6017782
) and CURIEs for this resource that look like
MGI:MGI:6017782
(instead of the canonical form MGI:6017782
).
The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
A summary of the relations in the Bioregistry schema can be found here.
The metaregistry provides mappings between the Bioregistry and other registries. There are 13 mappings to external registries for this resource with 6 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
MGI
|
|
Cellosaurus
![]() |
cellosaurus |
MGI
|
|
EDAM
|
edam |
3274
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.fcwyhz
|
|
GO
![]() |
go |
MGI
|
|
Identifiers.org
![]() |
miriam |
mgi
|
|
N2T
![]() |
n2t |
mgi
|
|
NCBI
|
ncbi |
MGI
|
|
Prefix Commons
|
prefixcommons |
mgi
|
|
re3data
![]() |
re3data |
r3d100010266
|
|
RRID
![]() |
rrid |
MGI
|
|
UniProt
|
uniprot |
DB-0060
|
|
Wikidata
|
wikidata |
P671
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
MGI:6017782
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
agr |
MGI through the Alliance of Genome Resources | https://www.alliancegenome.org/gene/MGI:6017782 |
bio2rdf |
Bio2RDF | http://bio2rdf.org/mgi:6017782 |
mgi.marker |
MGI Marker | http://www.informatics.jax.org/marker/MGI:6017782 |