The miRBase Sequence Database is a searchable database of published miRNA sequences and annotation. This collection refers specifically to the mature miRNA sequence.

Prefix
mirbase.mature
Alternative Prefixes
MIRBASEM
Keywords
nucleotide sequence
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in miRBase mature miRNA should match this regular expression:
^MIMAT\d{7}$

Example Local Unique Identifier
MIMAT0046872   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from miRBase mature miRNA should match this regular expression:
^mirbase\.mature:MIMAT\d{7}$

Example CURIE
mirbase.mature:MIMAT0046872
Metaregistry miRBase mature miRNA

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for mirbase.mature with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext MIRBASE.MATURE
Identifiers.org Identifiers.org logo miriam mirbase.mature
N2T Name-to-Thing logo n2t mirbase.mature
Prefix Commons Prefix Commons logo prefixcommons mirbase.mature
Wikidata Wikidata Property logo wikidata P2871
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE mirbase.mature:MIMAT0046872 is used to demonstrate the provides available for mirbase.mature. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
miRBase mature miRNA mirbase.mature http://mirbase.org/cgi-bin/mature.pl?mature_acc=MIMAT0046872
Bioregistry bioregistry https://bioregistry.io/mirbase.mature:MIMAT0046872
Identifiers.org miriam https://identifiers.org/mirbase.mature:MIMAT0046872
Name-to-Thing n2t https://n2t.net/mirbase.mature:MIMAT0046872
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/mirbase.mature:MIMAT0046872