GlycomeDB is the result of a systematic data integration effort, and provides an overview of all carbohydrate structures available in public databases, as well as cross-links.

Prefix
glycomedb
Keywords
life science molecules small molecules structure
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in GlycomeDB should match this regular expression:
^\w+$

Example Local Unique Identifier
G77500AY   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from GlycomeDB should match this regular expression:
^glycomedb:\w+$

Example CURIE
glycomedb:G77500AY
Publications
Ontology
Has Canonical
glytoucan
Metaregistry GlycomeDB

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for glycomedb with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext GLYCOMEDB
EDAM Ontology edam 2664
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.k5k0yh
Identifiers.org Identifiers.org logo miriam glycomedb
Name-to-Thing Name-to-Thing logo n2t glycomedb
Prefix Commons prefixcommons glycomedb
Registry of Research Data Repositories re3data r3d100011527
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE glycomedb:G77500AY is used to demonstrate the provides available for glycomedb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
GlycomeDB glycomedb https://glytoucan.org/Structures/Glycans/G77500AY
Bioregistry bioregistry https://bioregistry.io/glycomedb:G77500AY
Identifiers.org miriam https://identifiers.org/glycomedb:G77500AY
Name-to-Thing n2t https://n2t.net/glycomedb:G77500AY