GlycomeDB is the result of a systematic data integration effort, and provides an overview of all carbohydrate structures available in public databases, as well as cross-links.
glycomedb
Local identifiers in GlycomeDB should match this
regular expression:
^\w+$
Compact URIs (CURIEs) constructed from GlycomeDB should match
this regular expression:
^glycomedb:\w+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
GLYCOMEDB
|
|
EDAM
|
edam |
2664
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.k5k0yh
|
|
Identifiers.org
![]() |
miriam |
glycomedb
|
|
N2T
![]() |
n2t |
glycomedb
|
|
Prefix Commons
|
prefixcommons |
glycomedb
|
|
re3data
![]() |
re3data |
r3d100011527
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:G77500AY
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
GlycomeDB | glycomedb |
https://glytoucan.org/Structures/Glycans/G77500AY |
Bioregistry | bioregistry |
https://bioregistry.io/glycomedb:G77500AY |
Identifiers.org | miriam |
https://identifiers.org/glycomedb:G77500AY |
Name-to-Thing | n2t |
https://n2t.net/glycomedb:G77500AY |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/glycomedb:G77500AY |