Registry EST database maintained at the NCBI.
The dbEST contains sequence data and other information on "single-pass" cDNA sequences, or "Expressed Sequence Tags", from a number of organisms.
- Prefix
dbest- Keywords
- bioinformatics dna life science
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in EST database maintained at the NCBI. should match this regular expression:
^([A-Z]+)?\d+(\.\d+)?$ - Example Local Unique Identifier
- BP100000 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from EST database maintained at the NCBI. should match this regular expression:
^dbest:([A-Z]+)?\d+(\.\d+)?$ - Example CURIE
- dbest:BP100000
- Publications
- 1993 dbEST--database for "expressed sequence tags"
Metaregistry EST database maintained at the NCBI.
The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 4 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
DBEST
|
|
EDAM
|
edam |
1105
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.v9fya8
|
|
Identifiers.org
|
miriam |
dbest
|
|
N2T
|
n2t |
dbest
|
|
NCBI
|
ncbi |
dbEST
|
|
Prefix Commons
|
prefixcommons |
dbest
|
|
re3data
|
re3data |
r3d100010648
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
None:BP100000
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| EST database maintained at the NCBI. | dbest |
https://www.ncbi.nlm.nih.gov/nucest/BP100000 |
| Bioregistry | bioregistry |
https://bioregistry.io/dbest:BP100000 |
| Identifiers.org | miriam |
https://identifiers.org/dbest:BP100000 |
| Name-to-Thing | n2t |
https://n2t.net/dbest:BP100000 |
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
CURATOR_REVIEW |
dbEST through DNA Data Bank of Japan (DDBJ) | http://getentry.ddbj.nig.ac.jp/getentry/na/BP100000 |
bio2rdf |
Bio2RDF | http://bio2rdf.org/dbest:BP100000 |
ebi |
dbEST through European Nucleotide Archive (ENA) | https://www.ebi.ac.uk/ena/data/view/BP100000 |