Registry Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi.

Ensembl Genomes consists of five sub-portals (for bacteria, protists, fungi, plants and invertebrate metazoa) designed to complement the availability of vertebrate genomes in Ensembl. This collection is concerned with fungal genomes.

Prefix
ensembl.fungi
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi. should match this regular expression:
^[A-Z-a-z0-9]+$

Example Local Unique Identifier
CADAFLAT00006211   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi. should match this regular expression:
^ensembl\.fungi:[A-Z-a-z0-9]+$

Example CURIE
ensembl.fungi:CADAFLAT00006211
Metaregistry Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi.

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for ensembl.fungi with 4 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext ENSEMBL.FUNGI
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.bg5xqs
Gene Ontology Registry go EnsemblFungi
Identifiers.org Identifiers.org logo miriam ensembl.fungi
Name-to-Thing Name-to-Thing logo n2t ensembl.fungi
Prefix Commons prefixcommons ensembl.fungi
Registry of Research Data Repositories re3data r3d100011196
UniProt Cross-ref database uniprot EnsemblFungi
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ensembl.fungi:CADAFLAT00006211 is used to demonstrate the provides available for ensembl.fungi. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi. ensembl.fungi https://fungi.ensembl.org/id/CADAFLAT00006211
Bioregistry bioregistry https://bioregistry.io/ensembl.fungi:CADAFLAT00006211
Identifiers.org miriam https://identifiers.org/ensembl.fungi:CADAFLAT00006211
Name-to-Thing n2t https://n2t.net/ensembl.fungi:CADAFLAT00006211