Ensembl Genomes consists of five sub-portals (for bacteria, protists, fungi, plants and invertebrate metazoa) designed to complement the availability of vertebrate genomes in Ensembl. This collection is concerned with fungal genomes.

Prefix

ensembl.fungi

Keywords

comparative genomics genome genomics

Links

Homepage @ensemblgenomes

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi. should match this regular expression:
^[A-Z-a-z0-9]+$

Example Local Unique Identifier

CADAFLAT00006211   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi. should match this regular expression:
^ensembl\.fungi:[A-Z-a-z0-9]+$

Example CURIE

ensembl.fungi:CADAFLAT00006211

Publications

• 2020 Ensembl Genomes 2020-enabling non-vertebrate genomic research
• 2015 Ensembl Genomes 2016: more genomes, more complexity

Part Of (bfo:0000050 )

ensembl

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE None:CADAFLAT00006211 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.