UNITE is a fungal rDNA internal transcribed spacer (ITS) sequence database. It focuses on high-quality ITS sequences generated from fruiting bodies collected and identified by experts and deposited in public herbaria. Entries may be supplemented with metadata on describing locality, habitat, soil, climate, and interacting taxa.

Prefix
unite
Keywords
dna genome/gene organism sequence taxonomy
License
CC
Links
Homepage
Publications
https://bioregistry.io/pubmed:30371820
2010 The UNITE database for molecular identification of fungi--recent updates and future perspectives
Identifier Standards
Pattern for Local Unique Identifiers
Local unique identifiers in Unite should match this regular expression:
^UDB\d{6}$
Example Local Unique Identifier
UDB000691   Resolve
Pattern for CURIES
Compact URIs (CURIEs) constructed from Unite should match this regular expression:
^unite:UDB\d{6}$
Example CURIE
unite:UDB000691
Contacts
Contact
Missing Contact
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 8 mappings to external registries with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext UNITE
EDAM EDAM Data logo edam.data 2390
Integbio Integbio logo integbio nbdc01905
Identifiers.org namespace Identifiers.org namespace logo miriam unite
N2T n2t unite
NCBI ncbi.resource UNITE
Prefix Commons prefixcommons unite
re3data Registry of Research Data Repositories logo re3data r3d100011316
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier UDB000691 is used to demonstrate the providers available for Unite. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
Unite unite http://unite.ut.ee/bl_forw.php?nimi=UDB000691
Bioregistry bioregistry https://bioregistry.io/unite:UDB000691
Identifiers.org namespace miriam https://identifiers.org/unite:UDB000691
Name-to-Thing n2t https://n2t.net/unite:UDB000691
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/unite:UDB000691