miRTarBase is a database of miRNA-target interactions (MTIs), collected manually from relevant literature, following Natural Language Processing of the text to identify research articles related to functional studies of miRNAs. Generally, the collected MTIs are validated experimentally by reporter assay, western blot, microarray and next-generation sequencing experiments.

Prefix

mirtarbase

Keywords

life science

Links

Homepage

Contact

Sheng-Da Hsu   0000-0002-8214-1696

Pattern for Local Unique Identifiers

Local identifiers in mirTarBase ID should match this regular expression:
^MIRT\d{6}$

Example Local Unique Identifier

MIRT000002   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from mirTarBase ID should match this regular expression:
^mirtarbase:MIRT\d{6}$

Example CURIE

mirtarbase:MIRT000002

Publications

2010 miRTarBase: a database curates experimentally validated microRNA-target interactions.

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for mirtarbase with 3 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE mirtarbase:MIRT000002 is used to demonstrate the provides available for mirtarbase. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.