The European Nucleotide Archive (ENA) captures and presents information relating to experimental workflows that are based around nucleotide sequencing. ENA is made up of a number of distinct databases that includes EMBL-Bank, the Sequence Read Archive (SRA) and the Trace Archive each with their own data formats and standards. This collection references Embl-Bank identifiers.

Prefix
ena.embl
Alternative Prefixes
ena
Keywords
biodiversity bioinformatics data management dna functional genomics genomics metagenomics transcriptomics
Links
Homepage @enasequence
Contact
Guy Cochrane   0000-0001-7954-7057
Pattern for Local Unique Identifiers

Local identifiers in European Nucleotide Archive should match this regular expression:
^[A-Z]+[0-9]+(\.\d+)?$

Example Local Unique Identifier
BN000065   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from European Nucleotide Archive should match this regular expression:
^ena\.embl:[A-Z]+[0-9]+(\.\d+)?$

Example CURIE
ena.embl:BN000065
Publications
Ontology
Canonical For (2)
bioproject insdc.run
Metaregistry European Nucleotide Archive

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for ena.embl with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ENA.EMBL
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.dj8nt8
Gene Ontology Registry go ENA
Identifiers.org Identifiers.org logo miriam ena.embl
Name-to-Thing Name-to-Thing logo n2t ena.embl
Prefix Commons prefixcommons ena
Registry of Research Data Repositories re3data r3d100010527
UniProt Cross-ref database uniprot DB-0022
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ena.embl:BN000065 is used to demonstrate the provides available for ena.embl. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
European Nucleotide Archive ena.embl https://www.ebi.ac.uk/ena/browser/view/BN000065
Bioregistry bioregistry https://bioregistry.io/ena.embl:BN000065
Identifiers.org miriam https://identifiers.org/ena.embl:BN000065
Name-to-Thing n2t https://n2t.net/ena.embl:BN000065
None CURATOR_REVIEW https://www.ncbi.nlm.nih.gov/nuccore/BN000065
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
CURATOR_REVIEW ENA through GenBank https://www.ncbi.nlm.nih.gov/nuccore/BN000065