PATO is an ontology of phenotypic qualities, intended for use in a number of applications, primarily defining composite phenotypes and phenotype annotation.
pato
PATO
Local identifiers in Phenotype And Trait Ontology should match this
regular expression:
^\d{7}$
Compact URIs (CURIEs) constructed from Phenotype And Trait Ontology should match
this regular expression:
^PATO:\d{7}$
namespaceEmbeddedInLUI
as true. The actual
part that gets prefixed before the local unique identifier regex,
otherwise known as the banana, is PATO:
.
Therefore, you might see local unique identifiers written out as CURIEs.
The metaregistry provides mappings between the Bioregistry and other registries. There are
9 mappings to external registries for pato
.
Registry Name | Metaprefix | External Prefix |
---|---|---|
BioPortal Prefixes | bioportal |
PATO
|
FAIRSharing
|
fairsharing |
FAIRsharing.ezwdhz
|
Gene Ontology Registry | go |
PATO
|
Identifiers.org
![]() |
miriam |
pato
|
Name-to-Thing
![]() |
n2t |
pato
|
OBO Foundry
![]() |
obofoundry |
PATO
|
Ontology Lookup Service
![]() |
ols |
pato
|
OntoBee | ontobee |
PATO
|
Prefix Commons | prefixcommons |
PATO
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
pato:0001998
is used to demonstrate the provides available for
pato
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.