Registry Environmental conditions, treatments and exposures ontology

ECTO describes exposures to experimental treatments of plants and model organisms (e.g. exposures to modification of diet, lighting levels, temperature); exposures of humans or any other organisms to stressors through a variety of routes, for purposes of public health, environmental monitoring etc, stimuli, natural and experimental, any kind of environmental condition or change in condition that can be experienced by an organism or population of organisms on earth. The scope is very general and can include for example plant treatment regimens, as well as human clinical exposures (although these may better be handled by a more specialized ontology).

Prefix
ecto
Preferred Prefix
ECTO
Keywords
obo ontology
Version
2022-12-12
License
CC0-1.0
Links
Homepage Repository OBO OWL OBO JSON
Contact
Anne Thessen   0000-0002-2908-3327   diatomsRcool
Pattern for Local Unique Identifiers

Local identifiers in Environmental conditions, treatments and exposures ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Environmental conditions, treatments and exposures ontology should match this regular expression:
^ecto:\d{7}$

Example CURIE
ecto:0000001
Metaregistry Environmental conditions, treatments and exposures ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for ecto with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl ECTO
Biolink Biolink Model Registry logo biolink ECTO
BioPortal BioPortal Prefixes logo bioportal ECTO
OBO Foundry OBO Foundry logo obofoundry ecto
OLS Ontology Lookup Service logo ols ecto
OntoBee OntoBee logo ontobee ECTO
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ecto:0000001 is used to demonstrate the provides available for ecto. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Bioregistry bioregistry https://bioregistry.io/ecto:0000001
OBO Foundry obofoundry http://purl.obolibrary.org/obo/ECTO_0000001
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/ecto/terms?iri=http://purl.obolibrary.org/obo/ECTO_0000001
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/ECTO/?p=classes&conceptid=http://purl.obolibrary.org/obo/ECTO_0000001