Registry Provisional Cell Ontology

Cell types that are provisionally defined by experimental techniques such as single cell transcriptomics rather than a straightforward & coherent set of properties.

Preferred Prefix
CC BY 4.0
Homepage Repository OBO OWL OBO JSON
David Osumi-Sutherland   0000-0002-7073-9172   dosumis
Pattern for Local Unique Identifiers

Local identifiers in Provisional Cell Ontology should match this regular expression:

Example Local Unique Identifier
0011124   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Provisional Cell Ontology should match this regular expression:

Example CURIE
Brain Data Standards Ontology: A data-driven ontology of transcriptomically defined cell types in the primary motor cortex
Metaregistry Provisional Cell Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for pcl with 2 unique external prefixes.

Registry Name Metaprefix External Prefix
AberOWL aberowl PCL
BioPortal Prefixes bioportal PCL
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.bfcfd0
OBO Foundry OBO Foundry logo obofoundry pcl
Ontology Lookup Service Ontology Lookup Service logo ols pcl
OntoBee ontobee PCL

Providers are various services that resolve CURIEs to URLs. The example CURIE pcl:0011124 is used to demonstrate the provides available for pcl. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Bioregistry bioregistry
OBO Foundry obofoundry
Ontology Lookup Service ols
BioPortal Prefixes bioportal