Registry Zebrafish Phenotype Ontology

The Zebrafish Phenotype Ontology formally defines all phenotypes of the Zebrafish model organism.

Prefix: zp
Preferred Prefix: ZP
Keywords: obo ontology
Version: 2021-12-12
License: CC-BY-3.0
Links: Homepage Repository OBO OWL
Contact: Yvonne Bradford 0000-0002-9900-7880 ybradford
Pattern for Local Unique Identifiers: Local identifiers in Zebrafish Phenotype Ontology should match this regular expression:
^\d+$
Example Local Unique Identifier: 0019030 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Zebrafish Phenotype Ontology should match this regular expression:
^zp:\d+$
Example CURIE: zp:0019030

Ontology

Depends On (7) (bioregistry.schema:0000017 ): BFO BSPO GO PATO RO UBERON ZFA

Metaregistry Zebrafish Phenotype Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for zp with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`ZP`
BioContext	`biocontext`	`ZP`
BioPortal	`bioportal`	`ZP`
OBO Foundry	`obofoundry`	`zp`
OLS	`ols`	`zp`
OntoBee	`ontobee`	`ZP`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE zp:0019030 is used to demonstrate the provides available for zp. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
Zebrafish Phenotype Ontology	`zp`	http://purl.obolibrary.org/obo/ZP_0019030
Bioregistry	`bioregistry`	https://bioregistry.io/zp:0019030
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/ZP_0019030
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols/ontologies/zp/terms?iri=http://purl.obolibrary.org/obo/ZP_0019030
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/ZP/?p=classes&conceptid=http://purl.obolibrary.org/obo/ZP_0019030

Get the version:

>>> import bioregistry as br
>>> br.get_version("zp")
'2021-12-12'

Get the license:

>>> import bioregistry as br
>>> br.get_license("zp")
'CC-BY-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("zp")
'https://github.com/obophenotype/zebrafish-phenotype-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("zp")
'https://github.com/obophenotype/zebrafish-phenotype-ontology'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("zp")
'http://purl.obolibrary.org/obo/zp.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("zp")
'http://purl.obolibrary.org/obo/zp.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("zp")
'Yvonne Bradford'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("zp")
'ybradford@zfin.org'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("zp")
'ybradford'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("zp")
'0000-0002-9900-7880'