Registry Xenopus Phenotype Ontology

XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and tropicalis.

Prefix: xpo
Preferred Prefix: XPO
Keywords: obo ontology
Version: 2024-04-18
License: CC-BY-3.0
Links: Homepage Repository OBO OWL
Contact: Erik Segerdell 0000-0002-9611-1279 seger
Pattern for Local Unique Identifiers: Local identifiers in Xenopus Phenotype Ontology should match this regular expression:
^\d+$
Example Local Unique Identifier: 0100002 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Xenopus Phenotype Ontology should match this regular expression:
^XPO:\d+$
Example CURIE: XPO:0100002
Publications: 2022 The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development

Ontology

A summary of the relations in the Bioregistry schema can be found here.

Depends On (8) (bioregistry.schema:0000017 ): BFO CHEBI CL GO IAO PATO RO XAO

Metaregistry Xenopus Phenotype Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`XPO`
Biolink	`biolink`	`XPO`
BioPortal	`bioportal`	`XPO`
OBO Foundry	`obofoundry`	`xpo`
OLS	`ols`	`xpo`
OntoBee	`ontobee`	`XPO`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/XPO_$1

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0100002 is used to demonstrate the providers available for Xenopus Phenotype Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Xenopus Phenotype Ontology	`xpo`	http://purl.obolibrary.org/obo/XPO_0100002
Xenopus Phenotype Ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/XPO_0100002
Bioregistry	`bioregistry`	https://bioregistry.io/xpo:0100002
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/XPO_0100002
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/xpo/terms?iri=http://purl.obolibrary.org/obo/XPO_0100002
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/XPO/?p=classes&conceptid=http://purl.obolibrary.org/obo/XPO_0100002

Get the version:

>>> import bioregistry as br
>>> br.get_version("xpo")
'2024-04-18'

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("xpo")
'Xenopus Phenotype Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("xpo")
'CC-BY-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("xpo")
'https://github.com/obophenotype/xenopus-phenotype-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("xpo")
'https://github.com/obophenotype/xenopus-phenotype-ontology'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("xpo")
'http://purl.obolibrary.org/obo/xpo.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("xpo")
'http://purl.obolibrary.org/obo/xpo.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("xpo")
'Erik Segerdell'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("xpo")
'Erik.Segerdell@cchmc.org'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("xpo")
'seger'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("xpo")
'0000-0002-9611-1279'