Registry Planarian Phenotype Ontology

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Planarian Phenotype Ontology is an ontology of phenotypes observed in the planarian Schmidtea mediterranea.

Prefix: planp
Preferred Prefix: PLANP
Keywords: obo ontology
Version: 2020-03-28
License: CC-BY-3.0
Links: Homepage Repository OBO OWL
Contact: Sofia Robb 0000-0002-3528-5267 srobb1
Pattern for Local Unique Identifiers: Local identifiers in Planarian Phenotype Ontology should match this regular expression:
^\d+$
Example Local Unique Identifier: 0000001 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Planarian Phenotype Ontology should match this regular expression:
^PLANP:\d+$
Example CURIE: PLANP:0000001

Ontology

A summary of the relations in the Bioregistry schema can be found here.

Depends On (4) (bioregistry.schema:0000017 ): GO PATO PLANA RO

Metaregistry Planarian Phenotype Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`PLANP`
BioPortal	`bioportal`	`PLANP`
OBO Foundry	`obofoundry`	`planp`
OLS	`ols`	`planp`
OntoBee	`ontobee`	`PLANP`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/PLANP_$1

Providers

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A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000001 is used to demonstrate the providers available for Planarian Phenotype Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Planarian Phenotype Ontology	`planp`	http://purl.obolibrary.org/obo/PLANP_0000001
Planarian Phenotype Ontology (RDF)	`rdf`	http://purl.obolibrary.org/obo/PLANP_0000001
Bioregistry	`bioregistry`	https://bioregistry.io/planp:0000001
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/PLANP_0000001
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/planp/terms?iri=http://purl.obolibrary.org/obo/PLANP_0000001
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/PLANP/?p=classes&conceptid=http://purl.obolibrary.org/obo/PLANP_0000001

Get the version:

>>> import bioregistry as br
>>> br.get_version("planp")
'2020-03-28'

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("planp")
'Planarian Phenotype Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("planp")
'CC-BY-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("planp")
'https://github.com/obophenotype/planarian-phenotype-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("planp")
'https://github.com/obophenotype/planarian-phenotype-ontology'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("planp")
'http://purl.obolibrary.org/obo/planp.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("planp")
'http://purl.obolibrary.org/obo/planp.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("planp")
'Sofia Robb'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("planp")
'smr@stowers.org'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("planp")
'srobb1'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("planp")
'0000-0002-3528-5267'