Collections NFDI4Biodiversity Collection
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A placeholder collection of ontologies, controlled vocabularies, and schemas relevant for the NFDI4Biodiversity Consortium created by the NFDI Section Metadata WG Ontology Harmonization and Mapping. The working group is in the process of identifying NFDI4Biodiversity Consortium members appropriate for maintaining this collection.

Identifier
0000040
Maintainers
Naouel Karam ORCiD logo
Ralph Schäfermeier ORCiD logo
Contributors
NFDI Section Metadata WG Ontology Harmonization and Mapping
Organizations
NFDI4BiodiversityROR logoWikidata logo
NFDIROR logoWikidata logo
Size
65
References
https://go.rocket.chat/invite?host=all-chat.nfdi.de&path=invite%2FEWutLP
Downloads
AberOWL AgroPortal BARTOC BioContext BiodivPortal Biolink BioPortal Bioregistry Cellosaurus CHEMINF CropOCT EcoPortal EDAM FAIRSharing GO HL7 Integbio LOV Identifiers.org N2T NCBI OBO Foundry OLS OntoBee Pathguide Prefix.cc Prefix Commons re3data RRID TIB-TS TogoID UniProt Wikidata Wikidata (E) Zazuko OLS Configurations
Prefix Name License Download
abcd AntiBodies Chemically Defined database CC-BY-4.0
ahol Animal Health Ontology for Livestock CC-BY-4.0
aism Ontology for the Anatomy of the Insect SkeletoMuscular system CC-BY-4.0
apto Agriculture Product Types Ontology CC-BY-4.0
atol Animal Trait Ontology for Livestock CC-BY-4.0
bco Biological Collections Ontology CC0-1.0
bfo Basic Formal Ontology CC-BY-4.0
biodivthes Biodiversity Thesaurus CC-BY-4.0
bohlmann Bohlmann Ontology CC0-1.0
bspo Biological Spatial Ontology CC-BY-3.0
caro Common Anatomy Reference Ontology CC-BY-4.0
chebi Chemical Entities of Biological Interest CC-BY-4.0
cl Cell Ontology CC-BY-4.0
cob Core Ontology for Biology and Biomedicine CC0-1.0
codata.rdmt CODATA Research Data Management Terminology CC-BY-4.0
colao Coleoptera Anatomy Ontology CC-BY-4.0
dcat Data Catalog CC-BY-4.0
dfg.fo DFG Classification of Subject Areas Ontology - 2020-2024 CC-BY-4.0
eco Evidence and Conclusion Ontology CC0-1.0
edam EDAM Ontology CC BY-SA 4.0
envo Environment Ontology CC0-1.0
envthes Thesaurus for long-term ecological research, monitoring, experiments CC-BY-4.0
eol Environment Ontology for Livestock CC-BY-4.0
flopo Flora Phenotype Ontology CC0-1.0
geonames GeoNames CC-BY-4.0
gfbio.biobank AMMOD Metabarcoding Ontology
gfbio.biol Biological Taxonomy Vocabulary 0.2 (Core)
gfbio.botany Biological Taxonomy Vocabulary 0.2 (Botany)
gfbio.ets Ecological Trait-data Standard CC-BY-4.0
gfbio.iho IHO World Seas
gfbio.kingdom Kingdom Ontology CC0-1.0
gfbio.top Thesaurus of Plant Characteristics
iadopt I-ADOPT Framework ontology CC-BY-4.0
inbio Invasion Biology Ontology CC BY-NC-SA 4.0
iso.3166 ISO 3166-1 Country Code
itis Integrated Taxonomic Information System CC0-1.0
lepao Lepidoptera Anatomy Ontology CC-BY-4.0
lpt Livestock Product Trait Ontology CC-BY-4.0
ncbitaxon NCBI Taxonomy CC0-1.0
nfdi.core NFDI Core Ontology CC0-1.0
oba Ontology of Biological Attributes CC0-1.0
oboe The Extensible Observation Ontology CC-BY-3.0
odm2.methodtype Method Type Vocabulary
odm2.specimentype Specimen Type Vocabulary
oim Ocean Information Model CC-BY-4.0
om Ontology of units of Measure CC-BY-4.0
pato Phenotype And Trait Ontology CC-BY-3.0
pco Population and Community Ontology CC0-1.0
po Plant Ontology CC-BY-4.0
prov PROV Namespace
qudt Quantities, Units, Dimensions, and Types Ontology CC-BY-4.0
ro Relation Ontology CC0-1.0
schema Schema.org
sosa Sensor, Observation, Sample, and Actuator Ontology Custom
sumso Sustainable Meat Systems Ontology CC-BY-4.0
sweet Semantic Web for Earth and Environment Technology Ontology CC0-1.0
swo Software ontology CC-BY-4.0
taxonconcept TaxonConcept Ontology
taxrank Taxonomic rank vocabulary CC0-1.0
tib.bk Basic Classification CC0-1.0
to Plant Trait Ontology CC-BY-4.0
uberon Uber Anatomy Ontology CC-BY-3.0
unesco.thesaurus UNESCO Thesaurus CC-BY-3.0-IGO
vbo Vertebrate Breed Ontology CC-BY-4.0
vt Vertebrate trait ontology CC-BY-4.0
Indirect Dependencies
Prefix Name
xsd XML Schema Definition
xml Extensible Markup Language
owl Web Ontology Language
rdfs RDF Schema
rdf Resource Description Framework
foaf Friend of a Friend
dcterms Dublin Core Metadata Initiative Terms
iao Information Artifact Ontology
ccon Cerrado Concepts Ontology