Registry Livestock Product Trait Ontology

The Livestock Product Trait Ontology (LPT) is a controlled vocabulary for the description of traits (measurable or observable characteristics) pertaining to products produced by or obtained from the body of an agricultural animal or bird maintained for use and profit.

Prefix: lpt
Keywords: animal husbandry ontology phenotype
License: CC-BY-4.0
Links: Homepage Repository OBO OWL

Identifier Standards

Pattern for Local Unique Identifiers: Local identifiers in Livestock Product Trait Ontology should match this regular expression:
^\d+$
Example Local Unique Identifier: 0000156 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Livestock Product Trait Ontology should match this regular expression:
^lpt:\d+$
Example CURIE: lpt:0000156

Contacts

Contact: Carissa Park 0000-0002-2346-5201 caripark
Contributors: submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection (1): NFDI4Biodiversity Collection

Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`LPT`
AgroPortal	`agroportal`	`LPT`
BioContext	`biocontext`	`LPT`
BiodivPortal	`biodivportal`	`LPT`
BioPortal	`bioportal`	`LPT`
FAIRSharing	`fairsharing`	`FAIRsharing.g78mbm`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000156 is used to demonstrate the providers available for Livestock Product Trait Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name	Provider Code	URI
Livestock Product Trait Ontology	`lpt`	http://purl.obolibrary.org/obo/LPT_0000156
Bioregistry	`bioregistry`	https://bioregistry.io/lpt:0000156

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("lpt")
'Livestock Product Trait Ontology'

Get the license:

>>> import bioregistry as br
>>> br.get_license("lpt")
'CC-BY-4.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("lpt")
'https://github.com/AnimalGenome/livestock-product-trait-ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("lpt")
'https://github.com/AnimalGenome/livestock-product-trait-ontology'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("lpt")
'https://github.com/AnimalGenome/livestock-product-trait-ontology/raw/master/current_release/lpt.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("lpt")
'https://github.com/AnimalGenome/livestock-product-trait-ontology/raw/master/current_release/lpt.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("lpt")
'Carissa Park'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("lpt")
'caripark@iastate.edu'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("lpt")
'caripark'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("lpt")
'0000-0002-2346-5201'