Registry NCBI organismal classification

The taxonomy contains the relationships between all living forms for which nucleic acid or protein sequence have been determined.

Prefix
ncbitaxon
Preferred Prefix
NCBITaxon
Alternative Prefixes
TaxonomyID NCBI_taxid TAX taxon taxonomy taxid NCBITaxon NCBI_Taxon_ID
Version
2021-06-10
Links
Homepage OBO OWL OBO JSON
Contact
frederic.bastian@unil.ch
Pattern for Local Unique Identifiers

Local identifiers in NCBI organismal classification should match this regular expression:
^\d+$

Example Local Unique Identifier
2170610   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from NCBI organismal classification should match this regular expression:
^NCBITaxon:\d+$

Example CURIE
NCBITaxon:2170610
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 12 mappings to external registries for ncbitaxon.

Registry Name Metaprefix External Prefix
BioPortal Prefixes bioportal NCBITAXON
Cellosaurus Registry cellosaurus NCBI_TaxID
Gene Ontology Registry go taxon
Identifiers.org miriam taxonomy
Name-to-Thing n2t taxonomy
National Center for Biotechnology Information Registry ncbi taxon
OBO Foundry obofoundry NCBITaxon
Ontology Lookup Service ols ncbitaxon
OntoBee ontobee NCBITaxon
Prefix Commons prefixcommons NCBITaxon
Scholia scholia ncbi-taxon
Wikidata Property wikidata P685
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
CURATOR_REVIEW Taxonomy through UniProt PURL https://purl.uniprot.org/taxonomy/2170610
ebi European Nucleotide Archive (ENA) https://www.ebi.ac.uk/ena/data/view/Taxon:2170610
CURATOR_REVIEW Bio2RDF https://bio2rdf.org/taxonomy:2170610