The taxonomy contains the relationships between all living forms for which nucleic acid or protein sequence have been determined.
ncbitaxon
NCBITaxon
Local identifiers in NCBI Taxonomy should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from NCBI Taxonomy should match
this regular expression:
^ncbitaxon:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
19 mappings to external registries for ncbitaxon
with
10 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL
![]() |
aberowl |
NCBITAXON
|
|
AgroPortal
|
agroportal |
NCBITAXON
|
|
BARTOC
|
bartoc |
509
|
|
BioContext | biocontext |
TAXONOMY
|
|
BioPortal
![]() |
bioportal |
NCBITAXON
|
|
Cellosaurus
![]() |
cellosaurus |
NCBI_TaxID
|
|
EDAM
|
edam |
1179
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.fj07xj
|
|
GO
![]() |
go |
taxon
|
|
HL7
![]() |
hl7 |
2.16.840.1.113883.6.205
|
|
Identifiers.org
![]() |
miriam |
taxonomy
|
|
N2T
![]() |
n2t |
taxonomy
|
|
NCBI
|
ncbi |
taxon
|
|
OBO Foundry
![]() |
obofoundry |
ncbitaxon
|
|
OLS
![]() |
ols |
ncbitaxon
|
|
OntoBee
![]() |
ontobee |
NCBITaxon
|
|
Prefix Commons
|
prefixcommons |
taxonomy
|
|
re3data
![]() |
re3data |
r3d100010415
|
|
Wikidata
|
wikidata |
P685
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
ncbitaxon:2170610
is used to demonstrate the provides available for
ncbitaxon
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
CURATOR_REVIEW |
Taxonomy through UniProt PURL | https://purl.uniprot.org/taxonomy/2170610 |
CURATOR_REVIEW |
Bio2RDF | https://bio2rdf.org/taxonomy:2170610 |
bio2rdf |
Bio2RDF | http://bio2rdf.org/taxonomy:2170610 |
ebi |
European Nucleotide Archive (ENA) | https://www.ebi.ac.uk/ena/data/view/Taxon:2170610 |
scholia |
Scholia | https://scholia.toolforge.org/ncbi-taxon/2170610 |