A vocabulary of taxonomic ranks (species, family, phylum, etc)

Prefix
taxrank
Preferred Prefix
TAXRANK
Keywords
life science obo ontology taxonomic classification taxonomy
Version
2016-04-15
License
CC0-1.0
Links
Homepage Repository OBO OWL
Contact
Jim Balhoff   0000-0002-8688-6599   balhoff
Pattern for Local Unique Identifiers

Local identifiers in Taxonomic rank vocabulary should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Taxonomic rank vocabulary should match this regular expression:
^TAXRANK:\d{7}$

Example CURIE
TAXRANK:0000001
Publications
2013 The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes
Metaregistry Taxonomic rank vocabulary

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl TAXRANK
BioContext biocontext TAXRANK
BioPortal BioPortal Prefixes logo bioportal TAXRANK
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.p1sejz
OBO Foundry OBO Foundry logo obofoundry taxrank
OLS Ontology Lookup Service logo ols taxrank
OntoBee OntoBee logo ontobee TAXRANK
Prefix Commons Prefix Commons logo prefixcommons taxrank
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/TAXRANK_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE TAXRANK:0000001 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Taxonomic rank vocabulary taxrank http://purl.obolibrary.org/obo/TAXRANK_0000001
Taxonomic rank vocabulary (RDF) rdf http://purl.obolibrary.org/obo/TAXRANK_0000001
Bioregistry bioregistry https://bioregistry.io/taxrank:0000001
OBO Foundry obofoundry http://purl.obolibrary.org/obo/TAXRANK_0000001
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/taxrank/terms?iri=http://purl.obolibrary.org/obo/TAXRANK_0000001
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/TAXRANK/?p=classes&conceptid=http://purl.obolibrary.org/obo/TAXRANK_0000001
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/taxrank:0000001