Codon usage in individual genes has been calculated using the nucleotide sequence data obtained from the GenBank Genetic Sequence Database. The compilation of codon usage is synchronized with each major release of GenBank.
This resource is a provider. This means that
while it may have its own prefix, it actually reuses the identifiers provided by the
ncbitaxon
prefix. For all use cases, you should use ncbitaxon
instead of cutg.
- Prefix
cutg- Keywords
- dna gene
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- 9606 Resolve
- Example CURIE
- cutg:9606
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry Codon Usage Tabulated from GenBank
The metaregistry provides mappings between the Bioregistry and other registries. There are 1 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Prefix Commons
|
prefixcommons |
cutg
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 9606 is used to demonstrate the providers
available for Codon Usage Tabulated from GenBank. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Codon Usage Tabulated from GenBank | cutg |
http://www.kazusa.or.jp/codon/cgi-bin/showcodon.cgi?species=9606 |
| Bioregistry | bioregistry |
https://bioregistry.io/cutg:9606 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/cutg:9606 |