Registry Genomic Epidemiology Ontology
The Genomic Epidemiology Ontology (GenEpiO) covers vocabulary necessary to identify, document and research foodborne pathogens and associated outbreaks.
- Prefix
genepio- Preferred Prefix
GENEPIO- Version
- 2022-02-06
- Links
- Homepage Repository OWL
- Contact
- Damion Dooley 0000-0002-8844-9165 ddooley
- Pattern for Local Unique Identifiers
-
Local identifiers in Genomic Epidemiology Ontology should match this regular expression:
^\d{7}$ - Example Local Unique Identifier
- 0001885 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Genomic Epidemiology Ontology should match this regular expression:
^GENEPIO:\d{7}$ - Example CURIE
- GENEPIO:0001885
Metaregistry Genomic Epidemiology Ontology
The metaregistry provides mappings between the Bioregistry and other registries. There are
5 mappings to external registries for genepio.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
FAIRSharing
|
fairsharing |
FAIRsharing.y1mmbv
|
OBO Foundry
|
obofoundry |
GENEPIO
|
Ontology Lookup Service
|
ols |
genepio
|
| OntoBee | ontobee |
GENEPIO
|
| Prefix Commons | prefixcommons |
GENEPIO
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
genepio:0001885 is used to demonstrate the provides available for
genepio. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.