Registry Genomic Epidemiology Ontology

The Genomic Epidemiology Ontology (GenEpiO) covers vocabulary necessary to identify, document and research foodborne pathogens and associated outbreaks.

Prefix
genepio
Preferred Prefix
GENEPIO
Version
2021-05-24
Links
Homepage OWL
Contact
damion_dooley@sfu.ca
Pattern for Local Unique Identifiers
Missing LUI pattern
Example Local Unique Identifier
0001885   Resolve
Pattern for CURIES
Could not construct CURIE pattern
Example CURIE
GENEPIO:0001885
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for genepio.

Registry Name Metaprefix External Prefix
OBO Foundry obofoundry GENEPIO
Ontology Lookup Service ols genepio
OntoBee ontobee GENEPIO
Prefix Commons prefixcommons GENEPIO
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE genepio:0001885 is used to demonstrate the provides available for genepio. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Genomic Epidemiology Ontology genepio http://purl.obolibrary.org/obo/GENEPIO_0001885
Bioregistry bioregistry https://bioregistry.io/genepio:0001885
OBO Foundry obofoundry http://purl.obolibrary.org/obo/GENEPIO_0001885
Ontology Lookup Service ols https://www.ebi.ac.uk/ols/ontologies/genepio/terms?iri=http://purl.obolibrary.org/obo/GENEPIO_0001885